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Bear

Shiny Frog Ltd. · Personal knowledge management

Markdown note-taking app for Mac, iPhone and iPad from Shiny Frog with nested tags, note links and iCloud sync, free with a Pro subscription

ProprietaryFreemiumPaidLocalNov 2, 2026

Docusaurus

Meta Open Source / React team · Documentation tooling

React-based static site generator from Meta for documentation sites with MDX content, versioning, localization and a plugin architecture

MITOpen sourceFreeLocalNov 2, 2026

Logseq

Logseq · Personal knowledge management

Open-source, outliner-based knowledge base storing notes as local Markdown or Org-mode files with block references, queries and a graph view

AGPL-3.0-onlyOpen sourceFreeLocalNov 2, 2026

Mermaid

Mermaid project (Knut Sveidqvist and contributors) · Design & prototyping

JavaScript library that renders flowcharts, sequence, class, state, ER, Gantt and other diagrams from a Markdown-like text syntax

MITOpen sourceFreeLocalNov 2, 2026

MkDocs

MkDocs project (Tom Christie and contributors) · Documentation tooling

Python static site generator for project documentation that builds a navigable site from Markdown files and a single YAML configuration

BSD-2-ClauseOpen sourceFreeLocalNov 2, 2026

Obsidian

Dynalist Inc. (Obsidian) · Personal knowledge management

In-depth entry

Local-first Markdown note-taking app with bidirectional links, graph view and a large community plugin ecosystem; optional paid Sync and Publish

ProprietaryFreePaidLocalBroken

Pandoc

John MacFarlane · LaTeX & typesetting

In-depth entry

Universal document converter that translates between Markdown, LaTeX, HTML, DOCX, EPUB, Typst, Jupyter and dozens of other formats, with citeproc and Lua filters

GPL-2.0-or-laterFreeOpen sourceLocalNov 2, 2026

Quarto

Posit Software, PBC · Academic writing & publishing

In-depth entry

Open-source scientific publishing system from Posit that renders Markdown with executable Python, R, Julia or Observable code to HTML, PDF, Word, slides, websites and books via Pandoc

MITFreeOpen sourceLocalNov 2, 2026

R Markdown

Posit Software, PBC · Academic writing & publishing

R package that turns Markdown documents with embedded R (and Python or SQL) chunks into HTML, PDF, Word, slides, books and dashboards through knitr and Pandoc

MITFreeOpen sourceLocalMaintenanceBroken

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