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Bear

Shiny Frog Ltd. · Personal knowledge management

Markdown note-taking app for Mac, iPhone and iPad from Shiny Frog with nested tags, note links and iCloud sync, free with a Pro subscription

ProprietaryFreemiumPaidLocalNov 2, 2026

Docusaurus

Meta Open Source / React team · Documentation tooling

React-based static site generator from Meta for documentation sites with MDX content, versioning, localization and a plugin architecture

MITOpen sourceFreeLocalNov 2, 2026

Jina Reader

Jina AI · Data collection & crawling

Prefix-style API from Jina AI that converts any public URL into LLM-ready Markdown (r.jina.ai) or returns web search results with content (s.jina.ai), with open-source server code

Apache-2.0FreemiumUsage-basedSelf-hostedNov 2, 2026

Logseq

Logseq · Personal knowledge management

Open-source, outliner-based knowledge base storing notes as local Markdown or Org-mode files with block references, queries and a graph view

AGPL-3.0-onlyOpen sourceFreeLocalNov 2, 2026

Mermaid

Mermaid project (Knut Sveidqvist and contributors) · Design & prototyping

JavaScript library that renders flowcharts, sequence, class, state, ER, Gantt and other diagrams from a Markdown-like text syntax

MITOpen sourceFreeLocalNov 2, 2026

MkDocs

MkDocs project (Tom Christie and contributors) · Documentation tooling

Python static site generator for project documentation that builds a navigable site from Markdown files and a single YAML configuration

BSD-2-ClauseOpen sourceFreeLocalNov 2, 2026

R Markdown

Posit Software, PBC · Academic writing & publishing

R package that turns Markdown documents with embedded R (and Python or SQL) chunks into HTML, PDF, Word, slides, books and dashboards through knitr and Pandoc

MITFreeOpen sourceLocalMaintenanceBroken

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